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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. PDE6G, Phosphodiesterase 6G, cGMP-specific, rod, gamma
Sequence ID:NM_002602
RefSeqGene ID:NG_009834
Entrez Gene ID:5148
Ensembl ID:ENSG00000185527

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Associated Diseases (from OMIM)

DiseaseOther Genes
RETINITIS PIGMENTOSA 57 

Cytogenetic Location (from UniGene)

Cytogenetic Location:17q25Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:17: 79617706 - 79623564

NM_002602 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
427337961748879618179
7347747961867479618714
7759797962018979620393
98010647962352279623606

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40029486Full LengthBC106884phosphodiesterase 6G, cGMP-specific, rod, gamma

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_002593  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_002602 NP_002593 P18545 EC 3.1.4.35 PDE6_gamma

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
M36476 AAA60044 P18545 EC 3.1.4.35
BC106884 AAI06885 P18545 EC 3.1.4.35
BX537414 CAD97656 P18545 EC 3.1.4.35
AM393102 CAL37980    
AM393717 CAL38593    

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens PDE6G NP_002593 M.musculus Pde6g 18588 Gene Info NP_036197 97

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta