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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. ITGB7, integrin, beta 7
Sequence ID:NM_000889
Entrez Gene ID:3695
Ensembl ID:ENSG00000139626

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:12q13.13Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:12: 53585107 - 53601035

 Exon Info From UCSC:
NM_000889

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4644086Full LengthBC015916integrin, beta 7

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_000880  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_000889 NP_000880 P26010 Integrin_beta
Integrin_B_tail
EGF_2

Related Sequences

 
mRNAGenPeptSwissProt
M68892 AAA59184 P26010
M62880 AAA59185 P26010
S80335 AAB21332 P26010
BC015916 AAH15916 P26010
DQ895448 ABM86374  
EU176336 ABW03787  
AK298239 BAH12742 B7Z506
AK300960 BAH13382 B7Z6U6
AK301523 BAH13505 B7Z769

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens ITGB7 NP_000880 M.musculus Itgb7 16421 Gene Info NP_038594 86
R.norvegicus Itgb7 25713   NP_037303 86

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)