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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. S100A4, S100 calcium binding protein A4
Sequence ID:NM_019554
NM_002961
RefSeqGene ID:NG_027993
Entrez Gene ID:6275
Ensembl ID:ENSG00000196154

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:1q21Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:1: 153516096 - 153518282

 Exon Info From UCSC:
NM_019554
NM_002961

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3456833Full LengthBC000838S100 calcium binding protein A4
4247807Full LengthBC016300S100 calcium binding protein A4

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_062427  NP_002952  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_002961 NP_002952 P26447 S_100
NM_019554 NP_062427 P26447 S_100

Related Sequences

 
mRNAGenPeptSwissProt
M80563 AAA51920 P26447
BC000838 AAH00838 P26447
BC016300 AAH16300 P26447
AY762982 AAV74399 Q5Q9Z3
DQ892788 ABM83714  
DQ896035 ABM87034  
AK292083 BAF84772 P26447
CR450345 CAG29341 P26447

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens S100A4 NP_002952 M.musculus S100a4 20198 Gene Info NP_035441 93
R.norvegicus S100a4 24615   NP_036750 91

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)