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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. ALOX12, arachidonate 12-lipoxygenase
Sequence ID:NM_000697
Entrez Gene ID:239
Ensembl ID:ENSG00000108839

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:17p13.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:17: 6912807 - 6914055

 Exon Info From UCSC:
NM_000697

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
7262463Full LengthBC069557arachidonate 12-lipoxygenase

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_000688  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_000697 NP_000688 P18054 EC 1.13.11.31 Lipoxygenase
PLAT

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
M62982 AAA51533 P18054 EC 1.13.11.31
M58704 AAA59523 P18054 EC 1.13.11.31
M35418 AAA60056 P18054 EC 1.13.11.31
S68587 AAD14020 P18054 EC 1.13.11.31
S68588 AAD14021 Q16120  
AF143883 AAD32700 P18054 EC 1.13.11.31
BC069557 AAH69557 P18054 EC 1.13.11.31

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens ALOX12 NP_000688 M.musculus Alox12 11684 Gene Info NP_031466 86
R.norvegicus Alox12 287454   NP_001099268 84

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)