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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. ABO, ABO blood group (transferase A, alpha 1-3-N-acetylgalactosaminyltransferase; transferase B, alpha 1-3-galactosyltransferase)
Sequence ID:NM_020469
RefSeqGene ID:NG_006669
Entrez Gene ID:28

Database Links

UniGeneEntrez GeneOMIMHPRDSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:9q34.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:9: 136131052 - 136150605

NM_020469 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
11181136130562136131742
11821294136132795136132907
12961316136132908136132928
13171352136133486136133521
13531400136135222136135269
14011457136136720136136776
14581527136137501136137570
15281580136150577136150629

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
7262430Full LengthBC069595ABO blood group (transferase A, alpha 1-3-N-acetylgalactosaminyltransferase; transferase B, alpha 1-3-galactosyltransferase)
40069575Full LengthBC111575ABO blood group (transferase A, alpha 1-3-N-acetylgalactosaminyltransferase; transferase B, alpha 1-3-galactosyltransferase)
7262418IncompleteBC069814ABO blood group (transferase A, alpha 1-3-N-acetylgalactosaminyltransferase; transferase B, alpha 1-3-galactosyltransferase)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_065202  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_020469 NP_065202 P16442 EC 2.4.1.40
EC 2.4.1.37
Glyco_transf_6

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
J05175 AAA36792 P16442 EC 2.4.1.40
EC 2.4.1.37
S44054 AAB23167 Q15951  
U15197 AAD14781    
AF134412 AAD26572 P16442 EC 2.4.1.40
EC 2.4.1.37
AF134413 AAD26573 P16442 EC 2.4.1.40
EC 2.4.1.37
AF134414 AAD26574 P16442 EC 2.4.1.40
EC 2.4.1.37
BC069595 AAH69595 P16442 EC 2.4.1.40
EC 2.4.1.37
BC069814 AAH69814 Q6IS73  
BC111575 AAI11576 P16442 EC 2.4.1.40
EC 2.4.1.37
AY579471 AAT90439 Q4VVG1  
AY727862 AAU93390 Q3ZMG8  
DQ139865 AAZ67147 Q45FB1  
JN791441 AER42120 G8IIL0  
JX398330 AFS31344 J9XP05  
JX398331 AFS31345 J9XP21  
JX398332 AFS31346 J9XT30  
JX398333 AFS31347 J9XV13  
JX519569 AFV30234    
JX519570 AFV30235    
AK302203 BAG63563 B4DY01  
FR691751 CBX20982 E1Y3Y6  
FR691752 CBX20983 E1Y3Y7  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens ABO NP_065202 R.norvegicus Abo_predicted 296504   XP_215986 76
M.musculus Abo 80908 Gene Info NP_109643 75
R.norvegicus Abo 65270   NP_075582 75
R.norvegicus Abo2 100301568   NP_001153735 75

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)