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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. TPM3, Tropomyosin 3
Sequence ID:BQ057452
RefSeqGene ID:NG_008621
Entrez Gene ID:7170
Ensembl ID:ENSG00000143549

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer Aberrations

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cervix, colon, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, placenta, pooled tissue, prostate, retina, salivary gland, skin, spleen, stem cell, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Associated Diseases (from OMIM)

DiseaseOther Genes
CAP MYOPATHY 
MYOPATHY, CONGENITAL, WITH FIBER-TYPE DISPROPORTION 1ACTA1
SEPN1

Cytogenetic Location (from UniGene)

Cytogenetic Location:1q21.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:1: 154141780 - 154155595


Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3506357Full LengthBC000771tropomyosin 3
4245271Full LengthBC008407tropomyosin 3
4246114Full LengthBC008425tropomyosin 3
4271142Full LengthBC062740tropomyosin 3
4389911Full LengthBC015403tropomyosin 3
6472532Full LengthBC072428tropomyosin 3

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001043351 NP_001036816    
NM_001043352 NP_001036817    
NM_001043353 NP_001036818    
NM_152263 NP_689476 Q8NAH0 Tropomyosin
NM_153649 NP_705935   Tropomyosin

Related Sequences

 
mRNAGenPeptSwissProt
M12128 AAA36775 Q6LDX7
AY004867 AAF87083 P06753
BC000771 AAH00771 P06753
BC008407 AAH08407 P06753
BC008425 AAH08425 P06753
BC015403 AAH15403 P06753
BC062740 AAH62740 Q5VU62
BC072428 AAH72428 P06753
AF474157 AAL84570 Q8TCG3
AB062125 BAB93457 Q8NI98
AK092690 BAC03946 Q8NAH0
AK092712 BAC03956 Q8NAG3
AK315504 BAG37888 B2RDE1
AK056997 BAG51839 Q5VU62
AK298678 BAG60842 B4DQ80
AK301674 BAG63147 B4DWT5
X04201 CAA27798 P06753
X04588 CAB37185 P06753
BX648485 CAI46046 Q5HYB6

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens TPM3 NP_689476 M.musculus Tpm3 59069 Gene Info NP_071709 87
C.elegans lev-11 173319   NP_001021695 60

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)