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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. IMPDH2, IMP (inosine 5'-monophosphate) dehydrogenase 2
Sequence ID:NM_000884
RefSeqGene ID:NG_012091
Entrez Gene ID:3615
Ensembl ID:ENSG00000178035

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:3p21.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:3: 49061113 - 49061791

 Exon Info From UCSC:
NM_000884

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3447994Full LengthBC012840IMP (inosine monophosphate) dehydrogenase 2
3545693Full LengthBC006124IMP (inosine monophosphate) dehydrogenase 2
4576285Full LengthBC015567IMP (inosine monophosphate) dehydrogenase 2

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_000875  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_000884 NP_000875 P12268 EC 1.1.1.205 IMPDH
CBS

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
J04208 AAA36112 P12268 EC 1.1.1.205
BC006124 AAH06124 P12268 EC 1.1.1.205
BC012840 AAH12840 P12268 EC 1.1.1.205
BC015567 AAH15567 P12268 EC 1.1.1.205
AY545560 AAS50155 Q6QE17  
DQ893403 ABM84329    
DQ896721 ABM87720    
AK293397 BAH11500 B7Z1G4  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens IMPDH2 NP_000875 M.musculus Gm15210 100042069 Gene Info XP_001478203 99

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)