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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. E2F1, E2F transcription factor 1
Sequence ID:NM_005225
Entrez Gene ID:1869
Ensembl ID:ENSG00000101412

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:20q11.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:20: 32263993 - 32264449

NM_005225 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
2415163226329232264784
151717423226491032265135
174318573226523132265345
185820103226600632266158
201122303226756032267779
223123213226813132268221
232227223227380932274209

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
6025053Full LengthBC050369E2F transcription factor 1
6055344Full LengthBC058902E2F transcription factor 1
3510651IncompleteBC005098E2F transcription factor 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_005216  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_005225 NP_005216 Q01094 E2F_TDP

Related Sequences

 
mRNAGenPeptSwissProt
M96577 AAA35782 Q01094
S49592 AAB24289 Q01094
BC005098 AAH05098 Q9BSD8
BC050369 AAH50369 Q01094
BC058902 AAH58902 Q01094

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens E2F1 NP_005216 M.musculus E2f1 13555 Gene Info NP_031917 86
R.norvegicus E2f1 399489   NP_001094248 86

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta