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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.

Gene Info

Gene Information For:Hs. CDH13, cadherin 13, H-cadherin (heart)
Sequence ID:NM_001220488
Entrez Gene ID:1012
Ensembl ID:ENSG00000140945

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

Cytogenetic Location (from UniGene)

Cytogenetic Location:16q23.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:16: 83636056 - 83829174

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4811561Full LengthBC030653cadherin 13, H-cadherin (heart)
4825734Full LengthBC028624cadherin 13, H-cadherin (heart)
4042282IncompleteBC012615cadherin 13, H-cadherin (heart)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_001248  

Protein Infomation

NM_001220488 NP_001207417    
NM_001220489 NP_001207418    
NM_001220490 NP_001207419    
NM_001220491 NP_001207420    
NM_001220492 NP_001207421    
NM_001257 NP_001248 P55290 Cadherin

Related Sequences

L34058 AAA35624 P55290
U59288 AAB18911 P55290
BC028624 AAH28624 P55290
BC030653 AAH30653 P55290
DQ891713 ABM82639  
DQ894890 ABM85816  
EU190357 ABW97440 P55290
EU190358 ABW97441 P55290
AK294277 BAH11722 B7Z236
AK295886 BAH12213 B7Z3H7
AK298612 BAH12826 B7Z590
AK304592 BAH14221 B7Z985
AK304733 BAH14247 B7Z9B1

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene Info Protein
H.sapiens CDH13 NP_001207417 R.norvegicus Cdh13 192248   NP_620244 94
M.musculus Cdh13 12554 Gene Info NP_062681 94

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)