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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. HSD17B1, hydroxysteroid (17-beta) dehydrogenase 1
Sequence ID:NM_000413
Entrez Gene ID:3292
Ensembl ID:ENSG00000108786

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:17q11-q21Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:17: 40701231 - 40707231

NM_000413 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
110654070398340705047
106612334070514140705308
123414134070545640705635
141415074070581140705904
150816854070642240706599
168622234070668640707223

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
8143755Full LengthBC104752hydroxysteroid (17-beta) dehydrogenase 1
8327403Full LengthBC111935hydroxysteroid (17-beta) dehydrogenase 1
4915712IncompleteBC019592hydroxysteroid (17-beta) dehydrogenase 1
5164359IncompleteBC037415hydroxysteroid (17-beta) dehydrogenase 1
5443970IncompleteBC033110hydroxysteroid (17-beta) dehydrogenase 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_000404  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_000413 NP_000404 P14061 EC 1.1.1.62 adh_short

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
M36263 AAA35600 P14061 EC 1.1.1.62
BC033110 AAH33110 Q8N512  
BC104752 AAI04753 P14061 EC 1.1.1.62
BC111935 AAI11936 P14061 EC 1.1.1.62
DQ469954 ABF13478 B3RFR9  
AK127832 BAG54583 P14061 EC 1.1.1.62
AK300143 BAG61929 B4DTB7  
AK300159 BAG61942 B4DTD0  
AK300452 BAG62173 B4DU11  
AK316292 BAH14663 B4DTD0  
X13440 CAA31792 P14061 EC 1.1.1.62

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens HSD17B1 NP_000404 R.norvegicus Hsd17b1 25322   NP_036983 71
M.musculus Hsd17b1 15485 Gene Info NP_034605 69

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)