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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. LDHC, lactate dehydrogenase C
Sequence ID:NM_002301
NM_017448
RefSeqGene ID:NG_011816
Entrez Gene ID:3948
Ensembl ID:ENSG00000166796

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:11p15.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:11: 18433906 - 18472790

 Exon Info From UCSC:
NM_002301
NM_017448

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4839028Full LengthBC019249lactate dehydrogenase C
5744600Full LengthBC064388lactate dehydrogenase C
30387780Full LengthBC090043lactate dehydrogenase C

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_059144  NP_002292  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_002301 NP_002292 P07864 EC 1.1.1.27 Ldh_1_N
Ldh_1_C
NM_017448 NP_059144 P07864 EC 1.1.1.27 Ldh_1_N
Ldh_1_C

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
U13680 AAA21348 P07864 EC 1.1.1.27
J02938 AAA59507 P07864 EC 1.1.1.27
BC019249 AAH19249 P07864 EC 1.1.1.27
BC064388 AAH64388 P07864 EC 1.1.1.27
BC090043 AAH90043 P07864 EC 1.1.1.27
AY286300 AAP37402 P07864 EC 1.1.1.27
GU479374 ADG58108 D6NKH9  
HQ448130 ADQ32611    
HQ386000 AEW43811 G9BCY7  
HQ386001 AEW43812 G9BCY8  
HQ386003 AEW43813 G9BCY9  
HQ386004 AEW43814 G9BCZ0  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens LDHC NP_002292 M.musculus Ldhc 16833 Gene Info NP_038608 75
R.norvegicus Ldhc 29634   NP_058962 73

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)