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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. PTGFR, prostaglandin F receptor (FP)
Sequence ID:NM_000959
NM_001039585
Entrez Gene ID:5737
Ensembl ID:ENSG00000122420

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:1p31.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:1: 78956842 - 79004219

 Exon Info From UCSC:
NM_000959
NM_001039585

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40025418Full LengthBC112965prostaglandin F receptor (FP)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_000950  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_000959 NP_000950 P43088 7tm_1
NM_001039585 NP_001034674    

Related Sequences

 
mRNAGenPeptSwissProt
L24470 AAA17684 P43088
AF004021 AAB63152 P43088
BC112965 AAI12966 P43088
AY337000 AAQ76788 P43088
AY485530 AAR84381 P43088
DQ890957 ABM81883  
DQ894120 ABM85046  
AK292845 BAF85534 P43088

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens PTGFR NP_000950 M.musculus Ptgfr 19220 Gene Info NP_032992 89
R.norvegicus Ptgfr 25652   NP_037247 88

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta