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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. SLC1A4, Solute carrier family 1 (glutamate/neutral amino acid transporter), member 4
Sequence ID:NM_003038
NM_001193493
Entrez Gene ID:6509
Ensembl ID:ENSG00000115902

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, pancreas, pancreatic islet, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:2p15-p13Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:2: 65216756 - 65248357

 Exon Info From UCSC:
NM_003038
NM_001193493

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4420405Full LengthBC026216solute carrier family 1 (glutamate/neutral amino acid transporter), member 4
6186177Full LengthBC072423solute carrier family 1 (glutamate/neutral amino acid transporter), member 4
3614401IncompleteBC007350solute carrier family 1 (glutamate/neutral amino acid transporter), member 4

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_003029  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001193493 NP_001180422    
NM_003038 NP_003029 P43007 SDF

Related Sequences

 
mRNAGenPeptSwissProt
L14595 AAA02761 P43007
L19444 AAA19438 P43007
BC026216 AAH26216 P43007
BC072423 AAH72423 P43007
DQ891127 ABM82053  
DQ894306 ABM85232  
AB026689 BAA94861 Q9P2X2
AK223486 BAD97206 Q53F03
AK313052 BAG35883 B2R7N6
AK295687 BAH12156 P43007
AK298472 BAH12797 B7Z561
AK315986 BAH14357 B7Z9M1

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens SLC1A4 NP_003029 M.musculus Slc1a4 55963 Gene Info NP_061349 90
R.norvegicus Slc1a4 305540   NP_942058 88

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)