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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. ZIC2, Zic family member 2
Sequence ID:NM_007129
RefSeqGene ID:NG_007085
Entrez Gene ID:7546
Ensembl ID:ENSG00000043355

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:13q32Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:13: 100634318 - 100637936

NM_007129 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
11075100634318100635392
10761239100637199100637362
12402681100637576100639017

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
100068968BC172274Zic family member 2 (odd-paired homolog, Drosophila)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_009060  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_007129 NP_009060 O95409 zf-C2H2

Related Sequences

 
mRNAGenPeptSwissProt
AF104902 AAC96325 O95409
AF193855 AAG28409 O95409
AF188733 AAG38995  
BC172274 AAI72274  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens ZIC2 NP_009060 M.musculus Zic2 22772 Gene Info NP_033600 99
R.norvegicus Zic2 361096   NP_001101862 95

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)