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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. SRA1, Steroid receptor RNA activator 1
Sequence ID:NM_001035235
NM_001253764
RefSeqGene ID:NG_031847
Entrez Gene ID:10011
Ensembl ID:ENSG00000213523

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, placenta, pooled tissue, prostate, retina, salivary gland, skin, stem cell, stomach, t-cell, testis, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:5q31.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:5: 139930089 - 139937036

Transcript StartTranscript EndChromosomal Start Chromosomal End
18860139929653139930495
861969139930645139930753
9701172139931566139931768
11731298139936731139936856
12991964139937012139937677

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
100062228Full LengthBC156760steroid receptor RNA activator 1
5504902IncompleteBC040043steroid receptor RNA activator 1
100015982BC152788steroid receptor RNA activator 1

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001035235 NP_001030312 Q9HD15  
NM_001253764 NP_001240693    

Related Sequences

 
mRNAGenPeptSwissProt
AF293024 AAG02114 Q9HD15
AF293025 AAG02115 Q9HD15
AF293026 AAG02116 Q9HD15
BC040043 AAH40043 Q9HD15
BC152788 AAI52789  
BC156760 AAI56761  
AF318361 AAL55868 Q9HD15
AK054960 BAG51445 B3KNT3

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens SRA1 NP_001030312 M.musculus Sra1 24068 Gene Info NP_079567 84
R.norvegicus Sra1 252891   NP_899158 82

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta