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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. ARF4, ADP-ribosylation factor 4
Sequence ID:NM_001660
Entrez Gene ID:378
Ensembl ID:ENSG00000168374

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer Aberrations

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:3p21.2-p21.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:3: 57557938 - 57582867

NM_001660 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
219545755709157558024
95510805756127457561399
108111525756304257563113
115312625756962457569733
126313435757011057570190
134417585758280057583214

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
2900495Full LengthBC003364ADP-ribosylation factor 4
3346199Full LengthBC008753ADP-ribosylation factor 4
4093061Full LengthBC016325ADP-ribosylation factor 4
4105832Full LengthBC022866ADP-ribosylation factor 4

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_001651  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001660 NP_001651 P18085 Arf

Related Sequences

 
mRNAGenPeptSwissProt
M36341 AAA53081 P18085
BC003364 AAH03364 P18085
BC008753 AAH08753 P18085
BC016325 AAH16325 P18085
BC022866 AAH22866 P18085
AF493883 AAM12597 P18085
DQ894082 ABM85008  
EU176202 ABW03653  
AK313008 BAG35844 P18085

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens ARF4 NP_001651 M.musculus Arf4 11843 Gene Info NP_031505 96
R.norvegicus Arf4 79120   NP_077065 96

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)