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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. RPL28, ribosomal protein L28
Sequence ID:NM_000991
NM_001136134
NM_001136135
NM_001136136
NM_001136137
Entrez Gene ID:6158
Ensembl ID:ENSG00000108107

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, pineal gland, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:19q13.4Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:19: 55901448 - 55903451

 Exon Info From UCSC:
NM_000991
NM_001136134
NM_001136135
NM_001136136
NM_001136137

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4054251Full LengthBC010173ribosomal protein L28
4301420Full LengthBC010182ribosomal protein L28
4561118Full LengthBC011582ribosomal protein L28

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_000982  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_000991 NP_000982 P46779 Ribosomal_L28e
NM_001136134 NP_001129606    
NM_001136135 NP_001129607    
NM_001136136 NP_001129608    
NM_001136137 NP_001129609    

Related Sequences

 
mRNAGenPeptSwissProt
U14969 AAA85657 P46779
BC010173 AAH10173 P46779
BC010182 AAH10182 P46779
BC011582 AAH11582 P46779
DQ893043 ABM83969  
DQ896287 ABM87286  
D28451 BAA05817  
AB209627 BAD92864 Q59F34
AK311760 BAG34703 P46779
AK293736 BAG57160 P46779
CR457024 CAG33305 P46779

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens RPL28 NP_000982 M.musculus Rpl28 19943 Gene Info NP_033107 99
R.norvegicus Rpl28 64638   NP_073188 99
A.gambiae AgaP_AGAP005427 1276124   XP_315433 48
D.melanogaster RpL28 38397   NP_001163336 46

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)