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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. RPH3AL, Rabphilin 3A-like (without C2 domains)
Sequence ID:NM_006987
NM_001190412
NM_001190411
NM_001190413
RefSeqGene ID:NG_023031
Entrez Gene ID:9501
Ensembl ID:ENSG00000181031

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:17p13.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:17: 62293 - 183725

 Exon Info From UCSC:
NM_006987
NM_001190412
NM_001190411
NM_001190413

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3529317Full LengthBC005153rabphilin 3A-like (without C2 domains)
7939621Full LengthBC093776rabphilin 3A-like (without C2 domains)
8322465Full LengthBC113413rabphilin 3A-like (without C2 domains)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_008918  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001190411 NP_001177340    
NM_001190412 NP_001177341    
NM_001190413 NP_001177342    
NM_006987 NP_008918 Q9UNE2 RPH3A_effector

Related Sequences

 
mRNAGenPeptSwissProt
AF129812 AAD45582 Q9UNE2
BC005153 AAH05153 Q9UNE2
BC093776 AAH93776 Q9UNE2
BC113413 AAI13414 Q9UNE2
HQ258174 ADR82928  
AK000469 BAA91186 Q9UNE2
AK291950 BAF84639 A8K7D5

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens RPH3AL NP_001177340 R.norvegicus Rph3al 171123   NP_598275 85
M.musculus Rph3al 380714 Gene Info NP_083824 83

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)