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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. SP1, Sp1 transcription factor
Sequence ID:NM_001251825
NM_003109
NM_138473
RefSeqGene ID:NG_030361
Entrez Gene ID:6667
Ensembl ID:ENSG00000185591

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:12q13.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:12: 53776395 - 53805118

 Exon Info From UCSC:
NM_003109
NM_138473

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5928633Full LengthBC062539Sp1 transcription factor
4516234IncompleteBC012008Sp1 transcription factor
5295465IncompleteBC043224Sp1 transcription factor

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_612482  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001251825 NP_001238754    
NM_003109 NP_003100    
NM_138473 NP_612482 P08047 zf-C2H2

Related Sequences

 
mRNAGenPeptSwissProt
J03133 AAA61154 P08047
AF252284 AAF67726 P08047
AF255682 AAF78781 P08047
BC043224 AAH43224 P08047
BC062539 AAH62539 P08047
FJ949572 ACR22508 C4PGM0
AB209678 BAD92915 Q59EY3
AK311995 BAG34933 B2R4Y6
AJ272134 CAB75345 P08047
FN908228 CBM42955 E4Z9M7

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens SP1 NP_612482 R.norvegicus Sp1 24790   NP_036787 97
M.musculus Sp1 20683 Gene Info NP_038700 96
A.gambiae AgaP_AGAP004438 1274581   XP_313726 42
D.melanogaster CG5669 42882   NP_651232 35

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta