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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. CCL27, chemokine (C-C motif) ligand 27
Sequence ID:NM_006664
RefSeqGene ID:NG_028966
Entrez Gene ID:10850
Ensembl ID:ENSG00000213927

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:9p13Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:9: 34661899 - 34662689

NM_006664 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
242073466189234662075
2083403466228034662412
3414693466256034662688

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
8860203Full LengthBC148263chemokine (C-C motif) ligand 27
100066374Full LengthBC166648chemokine (C-C motif) ligand 27
5248278IncompleteBC037171chemokine (C-C motif) ligand 27

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_006664 NP_006655 Q9Y4X3
Q5VZ77
 

Related Sequences

 
mRNAGenPeptSwissProt
AF082393 AAD41238 Q9Y4X3
Q5VZ77
BC148263 AAI48264 Q5VZ77
BC166648 AAI66648  
AB010445 BAA87046 Q9Y4X3
Q5VZ77
AJ243542 CAB46983 Q9Y4X3
Q5VZ77

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens CCL27 NP_006655 M.musculus Gm13306 100039863 Gene Info NP_001157518 61
M.musculus Ccl27a 20301 Gene Info NP_035466 61
M.musculus Ccl27b 100040048   XP_003085473 61
M.musculus Gm2506 100039939 Gene Info XP_003085468 61

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)