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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. PRG4, proteoglycan 4
Sequence ID:NM_001127708
NM_001127709
NM_001127710
NM_005807
RefSeqGene ID:NG_008248
Entrez Gene ID:10216
Ensembl ID:ENSG00000116690

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Associated Diseases (from OMIM)

DiseaseOther Genes
CAMPTODACTYLY-ARTHROPATHY-COXA VARA-PERICARDITIS SYNDROME 

Cytogenetic Location (from UniGene)

Cytogenetic Location:1q25-q31Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:1: 186265410 - 186283204

 Exon Info From UCSC:
NM_001127708
NM_001127709
NM_001127710
NM_005807

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_005798  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001127708 NP_001121180    
NM_001127709 NP_001121181    
NM_001127710 NP_001121182    
NM_005807 NP_005798 Q92954 Hemopexin
Somatomedin_B

Related Sequences

 
mRNAGenPeptSwissProt
U70136 AAB09089 Q92954
AY653037 AAT74745 Q92954
AY653038 AAT74746 Q92954
AK131434 BAD18580 Q92954
AK057197 BAG51882 B3KQ20
AK301343 BAG62891 B4DW29
AK297718 BAH12654 B7Z4R8
AK301487 BAH13495 B7Z759

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens PRG4 NP_005798 M.musculus Prg4 96875 Gene Info NP_067375 64

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)