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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.

Gene Info

Gene Information For:Hs. PQLC2, PQ loop repeat containing 2
Sequence ID:NM_001040125
Entrez Gene ID:54896
Ensembl ID:ENSG00000040487

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

Cytogenetic Location (from UniGene)

Cytogenetic Location:1p36.13Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:1: 19638821 - 19655774

 Exon Info From UCSC:

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4426038Full LengthBC015324PQ loop repeat containing 2

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_060235  

Protein Infomation

NM_001040125 NP_001035214 Q6ZP29  
NM_001040126 NP_001035215    
NM_017765 NP_060235   PQ-loop

Related Sequences

BC015324 AAH15324 Q6ZP29
JF432591 ADZ15808  
AK000327 BAA91088 Q6ZP29
AK130171 BAC85296 Q6ZP29
AK130175 BAC85298 Q6ZP29
AK172745 BAD18732 Q6ZP29
AK125580 BAG54217 Q6ZP29

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene Info Protein
H.sapiens PQLC2 NP_001035214 M.musculus Pqlc2 212555 Gene Info NP_663359 86
N.crassa NCU00300 3873941   XP_957771 43
C.elegans Y43H11AL.2 3565323   NP_493686 38
S.cerevisiae YOL092W 854061   NP_014549 36

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)