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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. OR3A1, olfactory receptor, family 3, subfamily A, member 1
Sequence ID:NM_002550
Entrez Gene ID:4994
Ensembl ID:ENSG00000180090

Database Links

UniGeneEntrez GeneEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:17p13.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:17: 3194928 - 3195876

NM_002550 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
194831949283195875

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
7262242Full LengthBC069414olfactory receptor, family 3, subfamily A, member 1
40004009Full LengthBC096187olfactory receptor, family 3, subfamily A, member 1
40004010Full LengthBC096188olfactory receptor, family 3, subfamily A, member 1
40004011Full LengthBC096189olfactory receptor, family 3, subfamily A, member 1
40004012Full LengthBC096190olfactory receptor, family 3, subfamily A, member 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_002541  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_002550 NP_002541 P47881 7tm_1

Related Sequences

 
mRNAGenPeptSwissProt
BC069414 AAH69414 P47881
BC096187 AAH96187 P47881
BC096188 AAH96188 P47881
BC096189 AAH96189 P47881
BC096190 AAH96190 P47881

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens OR3A1 NP_002541 R.norvegicus Olr1517 287516   NP_001001351 85
M.musculus Olfr402 258703 Gene Info NP_666919 83

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)