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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. REPIN1, replication initiator 1
Sequence ID:NM_001099695
NM_001099696
NM_013400
NM_014374
Entrez Gene ID:29803
Ensembl ID:ENSG00000214022

Database Links

UniGeneEntrez GeneEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, pineal gland, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, spleen, stem cell, stomach, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:7q36.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:7: 150067860 - 150071128

 Exon Info From UCSC:
NM_001099695
NM_001099696
NM_013400
NM_014374

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
2964536Full LengthBC000363replication initiator 1
3353279Full LengthBC001760replication initiator 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_037532  NP_055189  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001099695 NP_001093165    
NM_001099696 NP_001093166 Q9BWE0  
NM_013400 NP_037532   zf-C2H2
NM_014374 NP_055189   zf-C2H2

Related Sequences

 
mRNAGenPeptSwissProt
AF201303 AAF26712 Q9BWE0
BC000363 AAH00363 Q9BWE0
BC001760 AAH01760 Q9BWE0
EU446796 ABZ92325  
AK292670 BAF85359 A8K9F5
AJ245553 CAB53100 Q9BWE0

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens REPIN1 NP_001093165 R.norvegicus Repin1 445541   NP_001005893 88
M.musculus Repin1 58887 Gene Info NP_780308 88

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)