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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. GALNTL5, UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 5
Sequence ID:NM_145292
NR_033169
Entrez Gene ID:168391
Ensembl ID:ENSG00000106648

Database Links

UniGeneEntrez GeneEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:7q36.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:7: 151653533 - 151716927

NM_145292 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1231151653463151653693
232517151664292151664577
518638151668029151668149
639805151680070151680236
806928151684243151684365
9291178151699798151700047
11791296151704911151705028
12971446151711728151711877
14471734151716730151717017

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4825619Full LengthBC022021UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 5

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_660335  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_145292 NP_660335 Q7Z4T8 Glycos_transf_2

Related Sequences

 
mRNAGenPeptSwissProt
BC022021 AAH22021 Q7Z4T8
AF440400 AAM20912 Q7Z4T8
AF440404 AAP97318 Q7Z4T8
DQ890789 ABM81715  
DQ893945 ABM84871  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens GALNTL5 NP_660335 R.norvegicus Galntl5 499968   NP_001020319 68
M.musculus Galntl5 67909 Gene Info NP_080725 67

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)