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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. AGAP3, ArfGAP with GTPase domain, ankyrin repeat and PH domain 3
Sequence ID:NM_031946
NM_001042535
Entrez Gene ID:116988
Ensembl ID:ENSG00000133612

Database Links

UniGeneEntrez GeneEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, pineal gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, stem cell, stomach, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:7q36.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:7: 150784067 - 150820722

 Exon Info From UCSC:
NM_031946
NM_001042535

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5453989Full LengthBC044644ArfGAP with GTPase domain, ankyrin repeat and PH domain 3
4876287IncompleteBC069236centaurin, gamma 3
5183789IncompleteBC037543centaurin, gamma 3
5517750IncompleteBC048300ArfGAP with GTPase domain, ankyrin repeat and PH domain 3

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_114152  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001042535 NP_001036000    
NM_031946 NP_114152   Ank
PH
ArfGap
Miro

Related Sequences

 
mRNAGenPeptSwissProt
BC044644 AAH44644 Q86ST5
BC048300 AAH48300 Q86XV5
AF359283 AAK48932 Q96P47
AF413079 AAL04173 Q96P47
EU831533 ACE86452  
EU831441 ACE87128  
AK027415 BAB55097 Q96T14
AK096352 BAC04766 Q8N8Q2
AB209781 BAD93018 Q96P47
AK055393 BAG51510 B3KNZ8
AL442089 CAC09448 Q9H3X2

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens AGAP3 NP_114152 M.musculus Agap3 213990 Gene Info NP_631892 96
R.norvegicus Agap3 362300   NP_001102086 94

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)