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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. SLC4A2, solute carrier family 4, anion exchanger, member 2 (erythrocyte membrane protein band 3-like 1)
Sequence ID:NM_001199692
NM_001199693
NM_001199694
NM_003040
Entrez Gene ID:6522
Ensembl ID:ENSG00000164889

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, brain, cartilage, cerebellum, cerebrum, cervix, colon, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, placenta, pooled tissue, prostate, retina, salivary gland, skin, spleen, stem cell, stomach, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:7q36.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:7: 150755298 - 150773613


Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3501642Full LengthBC009434solute carrier family 4, anion exchanger, member 2 (erythrocyte membrane protein band 3-like 1)
3507709Full LengthBC004893solute carrier family 4, anion exchanger, member 2 (erythrocyte membrane protein band 3-like 1)
4125444Full LengthBC010069solute carrier family 4, anion exchanger, member 2 (erythrocyte membrane protein band 3-like 1)
4127724Full LengthBC009386solute carrier family 4, anion exchanger, member 2 (erythrocyte membrane protein band 3-like 1)
4814066Full LengthBC028601solute carrier family 4, anion exchanger, member 2 (erythrocyte membrane protein band 3-like 1)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_003031  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001199692 NP_001186621    
NM_001199693 NP_001186622    
NM_001199694 NP_001186623    
NM_003040 NP_003031 Q99654
P04920
HCO3_cotransp
Band_3_cyto

Related Sequences

 
mRNAGenPeptSwissProt
U62531 AAC50964 Q99654
BC004893 AAH04893 Q6PJY3
BC009386 AAH09386 P04920
BC009434 AAH09434 P04920
BC010069 AAH10069 Q6PJY3
BC028601 AAH28601 Q8TAG3
DQ896512 ABM87511  
EU176446 ABW03897  
AB209158 BAD92395 Q59GF1
AK312699 BAG35577 P04920
AK295767 BAG58592 B4DIT0
AK296065 BAH12249 B7Z3L3
X03918 CAA27556 P04920
X62137 CAA44067 P04920

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens SLC4A2 NP_001186621 M.musculus Slc4a2 20535 Gene Info NP_033233 95
R.norvegicus Slc4a2 24780   NP_058744 94
A.gambiae AgaP_AGAP006968 1270117   XP_308789 49
D.melanogaster CG8177 39147   NP_996034 47
A.gambiae AgaP_AGAP006115 1276784   XP_001688789 45
A.thaliana AT3G06450 819821   NP_001118590 30

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)