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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. GTF2I, General transcription factor IIi
Sequence ID:NM_032999
NM_033000
NM_033001
NM_001163636
NM_001518
RefSeqGene ID:NG_008179
Entrez Gene ID:2969
Ensembl ID:ENSG00000077809

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, retina, skin, soft tissue, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:7q11.23Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:7: 74072029 - 74175022

 Exon Info From UCSC:
NM_032999
NM_033000
NM_033001
NM_001163636
NM_001518

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5263270Full LengthBC099907general transcription factor II, i
5815493Full LengthBC070484general transcription factor II, i

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_127493  NP_001509  NP_127494  NP_127492  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001163636 NP_001157108    
NM_001518 NP_001509   GTF2I
NM_032999 NP_127492 P78347 GTF2I
NM_033000 NP_127493   GTF2I
NM_033001 NP_127494   GTF2I

Related Sequences

 
mRNAGenPeptSwissProt
U77948 AAB48826 P78347
AF015553 AAB70791 P78347
AF035737 AAC08312 P78347
AF038967 AAC08313 P78347
AF038968 AAC08314 P78347
AF038969 AAC08315 P78347
BC004472 AAH04472 P78347
Q86U51
BC070484 AAH70484 P78347
BC099907 AAH99907 Q499G6
BT007450 AAP36118 Q86U51
AK292832 BAF85521 A8K9W7
AK294935 BAG58013 B4DH52
AK297238 BAG59719 B4DM07
Y14946 CAA75163 P78347

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens GTF2I NP_127494 M.musculus Gtf2i 14886 Gene Info NP_034495 97
R.norvegicus Gtf2i 353256   NP_001001512 97

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)