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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. CLIP2, CAP-GLY domain containing linker protein 2
Sequence ID:NM_003388
NM_032421
RefSeqGene ID:NG_011830
Entrez Gene ID:7461
Ensembl ID:ENSG00000106665

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:7q11.23Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:7: 73703804 - 73820260

 Exon Info From UCSC:
NM_003388
NM_032421

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
8860506Full LengthBC150332CAP-GLY domain containing linker protein 2
100015679Full LengthBC148702CAP-GLY domain containing linker protein 2
100014349BC140369CAP-GLY domain containing linker protein 2

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_003379  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_003388 NP_003379 Q9UDT6 CAP_GLY
NM_032421 NP_115797    

Related Sequences

 
mRNAGenPeptSwissProt
BC140369 AAI40370  
BC148702 AAI48703  
BC150332 AAI50333 A7E2F7
AY295764 AAP91873 Q7Z5B7
AB006629 BAA22960 Q9UDT6

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens CLIP2 NP_003379 M.musculus Clip2 269713 Gene Info NP_034120 92
R.norvegicus Clip2 29264   NP_068837 91

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)