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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. CBWD1, COBW domain containing 1
Sequence ID:NM_201453
NM_001085457
NM_001024916
Entrez Gene ID:55871
Ensembl ID:ENSG00000172785

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:9p24.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:9: 69256644 - 69262518

 Exon Info From UCSC:
NM_201453
NM_001085457
NM_001024916

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4069589Full LengthBC005996COBW domain containing 1
4133536Full LengthBC009573COBW domain containing 1
4133722Full LengthBC013432COBW domain containing 1
40146781Full LengthBC132759COBW domain containing 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_001020087  NP_958861  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001024916 NP_001020087   cobW
NM_001085457 NP_001078926 Q4V339  
NM_001145355 NP_001138827    
NM_001145356 NP_001138828    
NM_018491 NP_060961 Q9BRT8 cobW
CobW_C
NM_201453 NP_958861 Q6VB91
Q5JTY5
cobW
CobW_C

Related Sequences

 
mRNAGenPeptSwissProt
AF065414 AAC17121 O60748
AF257330 AAF68990 Q9BRT8
AF293368 AAG10070 Q9HAZ6
AF265442 AAG44700 Q9H2J8
BC005996 AAH05996 Q9BRT8
BC009573 AAH09573 Q9BRT8
BC013432 AAH13432 Q9BRT8
BC043420 AAH43420 Q5JTY1
BC067803 AAH67803 Q6NVZ8
BC132759 AAI32760 Q9BRT8
BC141856 AAI41857 Q6NVZ8
BC172342 AAI72342 Q5JTY5
AF212253 AAK14935 Q9BRT8
AY320414 AAP73813 Q9BRT8
AY343911 AAQ76869 Q9BRT8
AY344633 AAQ76870 Q6VB91
HQ447613 ADQ32099  
HQ258394 ADR83148  
JF432127 ADZ15344  
AK290648 BAF83337 Q9BRT8
AK292585 BAF85274 A8K970
AK315855 BAF98746 Q9BRT8
AK293173 BAG56717 B4DDF6
AK297912 BAG60231 B4DNG9
AK297292 BAH12539 B7Z4F3

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens CBWD1 NP_060961 M.musculus Cbwd1 226043 Gene Info NP_666209 82
R.norvegicus Cbwd1 171057   NP_598219 80
N.crassa NCU11371 5847191   XP_001728089 47
A.thaliana AT1G26520 839192   NP_173974 40

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)