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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. TREX2, Three prime repair exonuclease 2
Sequence ID:NM_080701
RefSeqGene ID:NG_029986
Entrez Gene ID:11219
Ensembl ID:ENSG00000183479

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:Xq28Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:X: 152710177 - 152710888

NM_080701 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
2776152710178152710952
7771255152711466152711944

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
100063265Full LengthBC157021three prime repair exonuclease 2
100061644BC156244three prime repair exonuclease 2

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_080701 NP_542432    

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
AF151107 AAD48776 Q9BQ50 EC 3.1.11.2
BC156244 AAI56245    
BC157021 AAI57022    
DQ891762 ABM82688    

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens TREX2 NP_542432 M.musculus Trex2 24102 Gene Info NP_036037 88
R.norvegicus Trex2 309275   NP_001101050 87

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)