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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. GPC3, glypican 3
Sequence ID:NM_001164617
NM_001164618
NM_001164619
NM_004484
RefSeqGene ID:NG_009286
Entrez Gene ID:2719
Ensembl ID:ENSG00000147257

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Associated Diseases (from OMIM)

DiseaseOther Genes
SIMPSON-GOLABI-BEHMEL SYNDROME, TYPE 1 
WILMS TUMORBRCA2
WT1

Cytogenetic Location (from UniGene)

Cytogenetic Location:Xq26.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:X: 132669962 - 133119621

 Exon Info From UCSC:
NM_001164617
NM_001164618
NM_001164619
NM_004484

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4603748Full LengthBC035972glypican 3

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_004475  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001164617 NP_001158089    
NM_001164618 NP_001158090    
NM_001164619 NP_001158091    
NM_004484 NP_004475 P51654 Glypican

Related Sequences

 
mRNAGenPeptSwissProt
U50410 AAA93471 P51654
L47125 AAA98132 P51654
L47176 AAB58806 P51654
BC035972 AAH35972 Q8IYG2
DQ349136 ABC72125 Q2L882
DQ349137 ABC72126 Q53H15
DQ349138 ABC72127 Q2L880
DQ893658 ABM84584  
DQ895822 ABM86748  
JQ943686 AFM30911 I6QTG3
AK222761 BAD96481 Q53H15
AK222766 BAD96486 Q53H15
AK300168 BAG61950 B4DTD8
Z37987 CAA86069 P51654

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens GPC3 NP_004475 M.musculus Gpc3 14734 Gene Info NP_057906 94
R.norvegicus Gpc3 25236   NP_036906 94

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)