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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. CSNK2A1, casein kinase 2, alpha 1 polypeptide
Sequence ID:NM_001895
NM_177559
NM_177560
RefSeqGene ID:NG_011970
Entrez Gene ID:1457
Ensembl ID:ENSG00000101266

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, pineal gland, pituitary gland, placenta, pooled tissue, prostate, retina, skin, spleen, stem cell, stomach, synovium, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:20p13Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:20: 464604 - 489195

 Exon Info From UCSC:
NM_001895
NM_177559
NM_177560

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3908058Full LengthBC053532casein kinase 2, alpha 1 polypeptide
4121882Full LengthBC011668casein kinase 2, alpha 1 polypeptide
5298655Full LengthBC050036casein kinase 2, alpha 1 polypeptide
5772615Full LengthBC071167casein kinase 2, alpha 1 polypeptide

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_001886  NP_808227  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_001895 NP_001886 P68400 EC 2.7.11.1 Pkinase
NM_177559 NP_808227 P68400 EC 2.7.11.1 Pkinase
NM_177560 NP_808228      

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
M55265 AAA35503 P68400 EC 2.7.11.1
J02853 AAA56821 P68400 EC 2.7.11.1
BC011668 AAH11668 P68400 EC 2.7.11.1
BC050036 AAH50036 Q5U5J2  
BC053532 AAH53532 P68400 EC 2.7.11.1
BC071167 AAH71167 P68400 EC 2.7.11.1
BT019792 AAV38595 P68400 EC 2.7.11.1
S53149 ABB72474 P68400 EC 2.7.11.1
DQ354583 ABC86794 Q2I0Y7  
DQ893102 ABM84028    
DQ896374 ABM87373    
AK312535 BAG35434 B2R6D7  
AK302583 BAG63838 P68400 EC 2.7.11.1
AB451279 BAG70093 P68400 EC 2.7.11.1
AB451411 BAG70225 B5BUH5  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens CSNK2A1 NP_808227 M.musculus Csnk2a1 12995 Gene Info NP_031814 99
R.norvegicus Csnk2a1 116549   NP_446276 98
D.melanogaster CkIIalpha 48448   NP_730775 89
A.gambiae AgaP_AGAP005569 1276254   XP_315576 86
C.elegans kin-3 172978   NP_492811 79
A.thaliana CKA2 824162   NP_190569 75
A.thaliana CKA1 836873   NP_201539 74
N.crassa NCU03124 3881116   XP_964983 71
S.pombe cka1 2541972   NP_593642 66
P.falciparum CK2alpha 810647   XP_001347771 66
S.cerevisiae CKA2 854227   NP_014704 60

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta