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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.

Gene Info

Gene Information For:Hs. BTRC, beta-transducin repeat containing E3 ubiquitin protein ligase
Sequence ID:NM_001256856
RefSeqGene ID:NG_009234
Entrez Gene ID:8945
Ensembl ID:ENSG00000166167

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

Cytogenetic Location (from UniGene)

Cytogenetic Location:10q24.32Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:10: 103113937 - 103310617

 Exon Info From UCSC:

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5180993Full LengthBC027994beta-transducin repeat containing

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_378663  NP_003930  

Protein Infomation

NM_001256856 NP_001243785    
NM_003939 NP_003930   WD40
NM_033637 NP_378663 Q9Y297 WD40

Related Sequences

AF101784 AAD08702 Q9Y297
AF129530 AAF04464 Q9Y297
BC027994 AAH27994 Q9Y297
AY207475 AAO59171 Q86WI5
AY207476 AAO59172 Q86WI4
GU727631 ADU87633 Q9Y297
JF432214 ADZ15431  
AK313353 BAG36155 Q9Y297
AK313417 BAG36210 B2R8L3
AK314880 BAG37395 B2RBZ8
AK295870 BAH12210 B7Z3H4
Y14153 CAA74572 Q9Y297
CR749295 CAH18150 Q68DS0

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene Info Protein
H.sapiens BTRC NP_378663 M.musculus Btrc 12234 Gene Info NP_001032847 99
R.norvegicus Btrc 361765   NP_001007149 99
D.melanogaster slmb 42504   NP_524430 81
A.gambiae AgaP_AGAP001944 1281180   XP_321118 77

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta