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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. MED1, mediator complex subunit 1
Sequence ID:NM_004774
Entrez Gene ID:5469
Ensembl ID:ENSG00000125686

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, pituitary gland, placenta, pooled tissue, prostate, skin, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:17q12Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:17: 37563657 - 37607489

 Exon Info From UCSC:
NM_004774

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40125129Full LengthBC131783mediator complex subunit 1
3546031IncompleteBC006517mediator complex subunit 1

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_004774 NP_004765 Q15648  

Related Sequences

 
mRNAGenPeptSwissProt
AF055994 AAC39854 Q15648
L40366 AAC41736 Q15648
AF283812 AAF98352 Q15648
BC006517 AAH06517 Q15648
BC060758 AAH60758 Q15648
BC131783 AAI31784 Q15648
JF432429 ADZ15646  
AK314185 BAG36866 B2RAG9
AK299789 BAG61669 B4DSK7
Y13467 CAA73867 Q15648

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens MED1 NP_004765 M.musculus Med1 19014 Gene Info NP_001073587 95
R.norvegicus Med1 497991   NP_001127833 95
A.gambiae AgaP_AGAP012219 1280472   XP_320318 30
D.melanogaster MED1 40403   NP_649341 27

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta