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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. NUP160, nucleoporin 160kDa
Sequence ID:NM_015231
Entrez Gene ID:23279
Ensembl ID:ENSG00000030066

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:11p11.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:11: 47861052 - 47869879

 Exon Info From UCSC:
NM_015231

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40124592Full LengthBC125227nucleoporin 160kDa
40124593Full LengthBC125228nucleoporin 160kDa
2960535IncompleteBC008700nucleoporin 160kDa

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_015231 NP_056046 Q12769  

Related Sequences

 
mRNAGenPeptSwissProt
BC008700 AAH08700 Q12769
BC009822 AAH09822 Q12769
BC125227 AAI25228 Q12769
BC125228 AAI25229 Q12769
D83781 BAA12110 Q12769
AK026236 BAB15406 Q12769
AK302396 BAG63710 Q12769
AK304308 BAG65161 Q12769

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens NUP160 NP_056046 R.norvegicus Nup160 311182   NP_001101214 94
M.musculus Nup160 59015 Gene Info NP_067487 93
D.melanogaster Nup160 34549   NP_609493 31

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)