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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. ACAA1, acetyl-CoA acyltransferase 1
Sequence ID:NM_001130410
NM_001607
NR_024024
RefSeqGene ID:NG_023225
Entrez Gene ID:30
Ensembl ID:ENSG00000060971

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, retina, skin, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:3p22.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:3: 38164205 - 38178464

 Exon Info From UCSC:
NM_001130410
NM_001607

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3345271Full LengthBC000635acetyl-Coenzyme A acyltransferase 1
3860150Full LengthBC011977acetyl-Coenzyme A acyltransferase 1
4908159Full LengthBC014474acetyl-Coenzyme A acyltransferase 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_001598  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_001130410 NP_001123882      
NM_001607 NP_001598 P09110 EC 2.3.1.16 Thiolase_N
Thiolase_C

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
AF035295 AAB88181 O43203  
BC000635 AAH00635 P09110 EC 2.3.1.16
BC011977 AAH11977 P09110 EC 2.3.1.16
BC014474 AAH14474 Q96CA6  
DQ891298 ABM82224    
DQ893346 ABM84272    
DQ894482 ABM85408    
AK293716 BAG57147 B4DEN6  
AK301056 BAG62666 B4DVF4  
AK303251 BAG64334 B4E072  
AK316551 BAG65629 B4DVF4  
X12966 CAA31412 P09110 EC 2.3.1.16
X14813 CAA32918 P09110 EC 2.3.1.16
X51460 CAA35825 Q8NCW8  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens ACAA1 NP_001598 R.norvegicus Acaa1b 501072   NP_001035108 87
R.norvegicus Acaa1a 24157   NP_036621 87
M.musculus Acaa1a 113868 Gene Info NP_570934 86
A.thaliana PKT4 839434   NP_171965 58
A.thaliana PKT3 817876   NP_180873 57
N.crassa NCU09646 3874873   XP_958712 49

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)