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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.

Gene Info

Gene Information For:Hs. SLC23A1, solute carrier family 23 (nucleobase transporters), member 1
Sequence ID:NM_005847
Entrez Gene ID:9963
Ensembl ID:ENSG00000170482

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

Cytogenetic Location (from UniGene)

Cytogenetic Location:5q31.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:5: 138707694 - 138718942

 Exon Info From UCSC:

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5188430Full LengthBC050261solute carrier family 23 (nucleobase transporters), member 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_005838  NP_689898  

Protein Infomation

NM_005847 NP_005838 Q9UHI7 Xan_ur_permease
NM_152685 NP_689898   Xan_ur_permease

Related Sequences

AF058317 AAC78804 Q9UHI7
AF098277 AAF22490 Q9UHI7
AF170911 AAF24759 Q9UHI7
BC019225 AAH19225 Q9UHI7
BC050261 AAH50261 Q9UHI7
AK290789 BAF83478 A8K424
AK092655 BAG52585 B3KS23
AK298337 BAG60585 B4DPH3
AK300935 BAG62564 B4DV52
AJ269477 CAB58119 Q9UHI7
AJ250807 CAC15384 Q9UHI7

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene Info Protein
H.sapiens SLC23A1 NP_005838 M.musculus Slc23a1 20522 Gene Info NP_035527 91
R.norvegicus Slc23a1 50621   NP_059011 91
A.thaliana PDE135 817192   NP_180219 35

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta