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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. RAD23A, RAD23 homolog A (S. cerevisiae)
Sequence ID:NM_001270362
NM_001270363
NM_005053
NR_072976
Entrez Gene ID:5886
Ensembl ID:ENSG00000179262

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebrum, cervix, colon, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, pineal gland, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, spleen, stem cell, stomach, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:19p13.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:19: 13056704 - 13063945

Transcript StartTranscript EndChromosomal Start Chromosomal End
11811305665313056833
1823431305866113058822
3445251305899013059171
5265811305931013059365
5827091305949913059626
7107881305989413059972
7899221306008813060221
92310871306350213063666
108817931306374913064454

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4300551Full LengthBC014026RAD23 homolog A (S. cerevisiae)
30389208Full LengthBC088364RAD23 homolog A (S. cerevisiae)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_005044  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001270362 NP_001257291    
NM_001270363 NP_001257292    
NM_005053 NP_005044 P54725 ubiquitin
UBA

Related Sequences

 
mRNAGenPeptSwissProt
BC014026 AAH14026 P54725
BC088364 AAH88364 Q5M7Z1
JF432697 ADZ15914  
D21235 BAA04767 P54725
AB209713 BAD92950 Q59EU8
AK289908 BAF82597 A8K1J3
AK293219 BAG56758 B4DDJ7

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens RAD23A NP_005044 M.musculus Rad23a 19358 Gene Info NP_033036 95
R.norvegicus Rad23a 361381   NP_001013208 94
D.melanogaster Rad23 43785   NP_651918 48
A.thaliana RAD23C 821195   NP_186903 44
A.thaliana RAD23D 833835   NP_198663 43
C.elegans rad-23 174785   NP_496488 43

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)