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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. LTB4R2, leukotriene B4 receptor 2
Sequence ID:NM_001164693
NM_001164692
NM_019839
Entrez Gene ID:56413
Ensembl ID:ENSG00000213906

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:14q11.2-q12Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:14: 24774397 - 24780595

 Exon Info From UCSC:
NM_001164692
NM_019839

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
100069242Full LengthBC172548leukotriene B4 receptor 2
4753033IncompleteBC038437leukotriene B4 receptor 2
40116226IncompleteBC119674leukotriene B4 receptor 2
40116228IncompleteBC127643leukotriene B4 receptor 2
100068934BC172240leukotriene B4 receptor 2

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_055245  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001164692 NP_001158164    
NM_014430 NP_055245 Q9UHD4 CIDE-N
NM_019839 NP_062813 Q9NPC1 7tm_1

Related Sequences

 
mRNAGenPeptSwissProt
AF190901 AAF23324 Q9UHD4
AF218586 AAF27658 Q9UHD4
AF277230 AAF81261 Q9NPC1
AF308571 AAG40857 Q5KU28
Q9NPC1
BC035970 AAH35970 Q9UHD4
BC119674 AAI19675 A1L156
BC127643 AAI27644 A1L156
BC172240 AAI72240  
BC172548 AAI72548  
AF544398 AAN37907 Q9UHD4
HQ447778 ADQ32263  
AK000387 BAA91132 Q9UHD4
AB044402 BAA99539 Q5KU28
Q9NPC1
AB029892 BAA99553 Q5KU28
Q9NPC1
AB032558 BAD83590 Q5KU28
AK122828 BAG53748 B3KVD6
AK304169 BAG65054 B4E292

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens LTB4R2 NP_001158164 R.norvegicus Ltb4r2 114098   NP_446092 94
M.musculus Ltb4r2 57260 Gene Info NP_065236 93

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)