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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. RAD54L, RAD54-like (S. cerevisiae)
Sequence ID:NM_001142548
NM_003579
RefSeqGene ID:NG_012144
Entrez Gene ID:8438
Ensembl ID:ENSG00000085999

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Associated Diseases (from OMIM)

DiseaseOther Genes
BREAST CANCERAKT1
ATM
BARD1
BRCA1
BRCA2
BRIP1
CASP8
CDH1
CHEK2
CHEK2
HMMR
KRAS
NQO2
NQO2
PALB2
PHB
PIK3CA
PIK3CA
PPM1D
RAD51
RB1CC1
SLC22A18
TP53
TP53
TSG101
XRCC3
XRCC3
LYMPHOMA, NON-HODGKINCASP10
PRF1

Cytogenetic Location (from UniGene)

Cytogenetic Location:1p32Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:1: 46713386 - 46744116

 Exon Info From UCSC:
NM_001142548
NM_003579

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40118437Full LengthBC121059RAD54-like (S. cerevisiae)
40118438Full LengthBC121060RAD54-like (S. cerevisiae)

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001142548 NP_001136020    
NM_003579 NP_003570 Q92698  

Related Sequences

 
mRNAGenPeptSwissProt
BC121059 AAI21060 Q92698
BC121060 AAI21061 Q92698
AK292611 BAF85300 A8K996
AK297204 BAG59689 B4DLX7
X97795 CAA66379 Q92698

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens RAD54L NP_001136020 M.musculus Rad54l 19366 Gene Info NP_001116431 95
R.norvegicus Rad54l 298429   NP_001128432 94
A.gambiae AgaP_AGAP008748 3291801   XP_557901 62
N.crassa NCU11255 3875617   XP_959470 58
C.elegans rad-54 172728   NP_492438 57
D.melanogaster okr 33507   NP_476661 56
S.pombe rhp54 2542749   NP_594290 56
S.cerevisiae RAD54 852713   NP_011352 54
A.thaliana RAD54 821455   NP_188552 49
P.falciparum PF08_0126 2655325   XP_001349480 44

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)