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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. RTP1, receptor (chemosensory) transporter protein 1
Sequence ID:NM_153708
Entrez Gene ID:132112
Ensembl ID:ENSG00000175077

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:3q27.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:3: 186914877 - 186925417

NM_153708 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1302186915273186915574
3032215186917338186919250

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5179096Full LengthBC065202receptor (chemosensory) transporter protein 1
5191824IncompleteBC034744receptor (chemosensory) transporter protein 1

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_153708 NP_714919 P59025  

Related Sequences

 
mRNAGenPeptSwissProt
BC034744 AAH34744 P59025
BC065202 AAH65202 P59025
AY562235 AAT70680 P59025
DQ890807 ABM81733  
DQ893962 ABM84888  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens RTP1 NP_714919 R.norvegicus Rtp1 288006   NP_001099340 92
M.musculus Rtp1 239766 Gene Info NP_001004151 90

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)