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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. CRX, cone-rod homeobox
Sequence ID:NM_000554
RefSeqGene ID:NG_008605
Entrez Gene ID:1406
Ensembl ID:ENSG00000105392

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data


Associated Diseases (from OMIM)

DiseaseOther Genes
CONE-ROD RETINAL DYSTROPHY-2 
LEBER CONGENITALAMAUROSIS 7 
RETINITIS PIGMENTOSA,JUVENILE, AUTOSOMAL RECESSIVEC2orf71
CNGB1
MERTK
RLBP1
SPATA7
USH2A

Cytogenetic Location (from UniGene)

Cytogenetic Location:19q13.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:19: 48322702 - 48323024

NM_000554 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
11694832509848325266
1703044833766548337799
3054564833949948339650
45744644834257648346583

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3869862Full LengthBC016664cone-rod homeobox
6144191Full LengthBC053672cone-rod homeobox
3871392IncompleteBC009045cone-rod homeobox

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_000554 NP_000545 O43186 Homeobox

Related Sequences

 
mRNAGenPeptSwissProt
BC016664 AAH16664 O43186
BC053672 AAH53672 O43186
BT007364 AAP36028 O43186
DQ426868 ABD90533 Q0QD45
DQ893564 ABM84490  
DQ894239 ABM85165  
EF432655 ABO31091 A4GUB7

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens CRX NP_000545 M.musculus Crx 12951 Gene Info NP_001106801 97
R.norvegicus Crx 60446   NP_068627 97

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)