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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. SRP19, signal recognition particle 19kDa
Sequence ID:NM_001204193
NM_001204194
NM_001204196
NM_001204199
NM_003135
Entrez Gene ID:6728
Ensembl ID:ENSG00000153037

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:5q21-q22Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:5: 112196977 - 112203234

Transcript StartTranscript EndChromosomal Start Chromosomal End
1122112196992112197113
123198112198204112198279
199270112200153112200224
271382112200317112200428
383885112203100112203602

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4252554Full LengthBC017830signal recognition particle 19kDa
4285753Full LengthBC010947signal recognition particle 19kDa
3352633IncompleteBC000186signal recognition particle 19kDa

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_003126  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_000038 NP_000029 P25054 Arm
APC_crr
SAMP
EB1_binding
APC_basic
APC_15aa
NM_001127510 NP_001120982    
NM_001127511 NP_001120983    
NM_001204193 NP_001191122    
NM_001204194 NP_001191123    
NM_001204196 NP_001191125    
NM_001204199 NP_001191128    
NM_003135 NP_003126   SRP19

Related Sequences

 
mRNAGenPeptSwissProt
M74088 AAA03586 P25054
M73548 AAA60353 P25054
M73548 AAA60354 P25054
S67787 AAD13997 Q16097
S67788 AAD13998 Q9UM98
S56365 AAD14918  
BC010947 AAH10947 P09132
BC017830 AAH17830 P09132
BC056268 AAH56268 Q7Z2Q8
BC111462 AAI11463  
BC111591 AAI11592  
BC111930 AAI11931  
D49676 BAA08532 Q15695
AB210001 BAE06083 Q4LE70
AK289567 BAF82256 A8K0K2
AK311803 BAG34746 P09132
AK294544 BAH11802 B7Z2B6
X12791 CAA31280 P09132

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens SRP19 NP_003126 M.musculus Srp19 66384 Gene Info NP_079803 97
R.norvegicus Srp19 291685   NP_001099627 97
D.melanogaster Srp19 38815   NP_477135 52
A.thaliana AT1G48160 841235   NP_175250 47
C.elegans F37F2.2 171711   NP_490855 47
A.gambiae AgaP_AGAP009948 1279366   XP_319081 45
A.gambiae AgaP_AGAP006895 1270182   XP_308859 44

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)