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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. CACNB1, calcium channel, voltage-dependent, beta 1 subunit
Sequence ID:NM_000723
NM_199247
NM_199248
Entrez Gene ID:782
Ensembl ID:ENSG00000067191

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:17q21-q22Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:17: 37330080 - 37353893

 Exon Info From UCSC:
NM_000723
NM_199247
NM_199248

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5262182Full LengthBC037311calcium channel, voltage-dependent, beta 1 subunit

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_000714  NP_954856  NP_954855  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_000723 NP_000714 Q02641 Ca_channel_B
NM_199247 NP_954855   Ca_channel_B
NM_199248 NP_954856   Ca_channel_B

Related Sequences

 
mRNAGenPeptSwissProt
M92301 AAA35631 Q02641
M92302 AAA35632 Q02641
M92303 AAA35633 Q02641
L06110 AAA36167 Q02641
L06111 AAA36168 Q02641
L06112 AAA36169 Q02641
M76560 AAA51894 Q02641
BC037311 AAH37311 Q02641
AY393857 AAQ97605 Q6TME4
DQ891688 ABM82614  
EU176608 ABW03409  
AB054985 BAB21444 Q02641
AB209176 BAD92413 Q59GD3
AK289729 BAF82418 Q02641
AK127283 BAG54473 B3KXG1
AK297643 BAH12640 B7Z4Q4
AK300666 BAH13323 B7Z6N7

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens CACNB1 NP_000714 M.musculus Cacnb1 12295 Gene Info NP_660099 98
R.norvegicus Cacnb1 50688   NP_059042 97

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)