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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. ARL6IP1, ADP-ribosylation factor-like 6 interacting protein 1
Sequence ID:NM_015161
Entrez Gene ID:23204
Ensembl ID:ENSG00000170540

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, pineal gland, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:16p12-p11.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:16: 18804242 - 18812866

NM_015161 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1717181880299018804691
171918031880592018806004
180419211880678518806902
192220411880924618809365
204221751881002218810155
217622801881275218812856

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3048642Full LengthBC010281ADP-ribosylation factor-like 6 interacting protein 1

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_015161 NP_055976 Q15041  

Related Sequences

 
mRNAGenPeptSwissProt
BC010281 AAH10281 Q15041
HQ448378 ADQ32858  
D31885 BAA06683 Q15041
AK291137 BAF83826 A8K522
AK300825 BAH13355 B7Z6R9
AK300869 BAH13361 B7Z6S5
AK301636 BAH13527 B7Z791

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens ARL6IP1 NP_055976 M.musculus Arl6ip1 54208 Gene Info NP_062292 97
R.norvegicus Arl6ip1 293551   NP_942032 97
D.melanogaster CG10326 42027   NP_650570 29

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)