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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. AGGF1, angiogenic factor with G patch and FHA domains 1
Sequence ID:NM_018046
RefSeqGene ID:NG_027822
Entrez Gene ID:55109
Ensembl ID:ENSG00000164252

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:5q13.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:5: 76342414 - 76359916

 Exon Info From UCSC:
NM_018046

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5266978Full LengthBC032844angiogenic factor with G patch and FHA domains 1
3885345IncompleteBC015478angiogenic factor with G patch and FHA domains 1
4252711IncompleteBC029382angiogenic factor with G patch and FHA domains 1
4498580IncompleteBC073864angiogenic factor with G patch and FHA domains 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_060516  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_018046 NP_060516 Q8N302 FHA
G-patch

Related Sequences

 
mRNAGenPeptSwissProt
U84971 AAB60856 Q8N302
BC002828 AAH02828 Q8N302
BC015478 AAH15478 A0JLT8
BC029382 AAH29382 Q8N302
BC032844 AAH32844 Q6PIK7
AY500994 AAR97615 Q8N302
JF432544 ADZ15761  
AK001145 BAA91519 Q8N302
AK289394 BAF82083 A8K029

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens AGGF1 NP_060516 R.norvegicus Aggf1 310005   XP_226709 81
M.musculus Aggf1 66549 Gene Info NP_079906 79
D.melanogaster CG8079 36689   NP_725443 36
A.gambiae AgaP_AGAP006281 1276935   XP_316345 33
C.elegans Y55D9A.2 178216   NP_502414 29

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)