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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. TRO, trophinin
Sequence ID:NM_001039705
NM_001271183
NM_001271184
NM_016157
NM_177556
NM_177557
NR_073148
NR_073149
RefSeqGene ID:NG_012806
Entrez Gene ID:7216
Ensembl ID:ENSG00000067445

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:Xp11.22-p11.21Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:X: 54947274 - 54957862

 Exon Info From UCSC:
NM_001039705
NM_016157
NM_177556

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4932728IncompleteBC026914trophinin

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_057241  NP_808224  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001039705 NP_001034794 Q12816  
NM_001271183 NP_001258112    
NM_001271184 NP_001258113    
NM_016157 NP_057241   MAGE
NM_177556 NP_808224   MAGE
NM_177557 NP_808225    

Related Sequences

 
mRNAGenPeptSwissProt
U04811 AAA79334 Q12816
AF349719 AAK30170 Q9BX91
AF349720 AAK30171 Q9BX90
AF349721 AAK30172 Q9BX89
AF349722 AAK30173 Q9BX88
AB029037 BAA83066 Q12816
AK001300 BAA91609 Q9NVY3
AK027489 BAB55149 Q12816
AK027861 BAG51387 B3KNM5
AK296329 BAG59020 B4DK08
AK299568 BAG61509 B4DS47

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens TRO NP_001034794 M.musculus Tro 56191 Gene Info NP_001002272 55

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)