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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. TACR1, tachykinin receptor 1
Sequence ID:NM_001058
NM_015727
RefSeqGene ID:NG_029522
Entrez Gene ID:6869
Ensembl ID:ENSG00000115353

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:2p12Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:2: 75276444 - 75426614

 Exon Info From UCSC:
NM_001058
NM_015727

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
30915310Full LengthBC074912tachykinin receptor 1
30915523Full LengthBC074911tachykinin receptor 1
6912748IncompleteBC095528tachykinin receptor 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_056542  NP_001049  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001058 NP_001049 P25103 7tm_1
NM_015727 NP_056542   7tm_1

Related Sequences

 
mRNAGenPeptSwissProt
M84425 AAA36641 P25103
M84426 AAA36644 P25103
M81797 AAA59933 P25103
M76675 AAA59936 P25103
M74290 AAA60601 P25103
S62045 AAB20168 P25103
BC074911 AAH74911 P25103
BC074912 AAH74912 P25103
BC095528 AAH95528 Q4VBL8
AY462098 AAR23925 P25103
AK289765 BAF82454 P25103

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens TACR1 NP_001049 M.musculus Tacr1 21336 Gene Info NP_033339 95
R.norvegicus Tacr1 24807   NP_036799 95

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)