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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. PGAM1, phosphoglycerate mutase 1 (brain)
Sequence ID:NM_002629
Entrez Gene ID:5223
Ensembl ID:ENSG00000171314

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, pineal gland, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:10q25.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:10: 99186035 - 99193183

NM_002629 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
11779918602699186202
1784529919013599190409
4536339919071199190891
63417199919211199193196

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
2821567Full LengthBC000455phosphoglycerate mutase 1 (brain)
3604026Full LengthBC010038phosphoglycerate mutase 1 (brain)
4299008Full LengthBC011678phosphoglycerate mutase 1 (brain)
5262935Full LengthBC066959phosphoglycerate mutase 1 (brain)
5787678Full LengthBC053356phosphoglycerate mutase 1 (brain)
6297173Full LengthBC073742phosphoglycerate mutase 1 (brain)
6584466Full LengthBC062302phosphoglycerate mutase 1 (brain)
8862699Full LengthBC157873phosphoglycerate mutase 1 (brain)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_002620  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_002629 NP_002620 P18669
Q6FHU2
EC 5.4.2.4
EC 5.4.2.1
EC 3.1.3.13
PGAM

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
J04173 AAA60071 P18669
Q6FHU2
EC 5.4.2.4
EC 5.4.2.1
EC 3.1.3.13
AY007118 AAG01990 P18669
Q6FHU2
EC 5.4.2.4
EC 5.4.2.1
EC 3.1.3.13
BC000455 AAH00455 Q0D2Q6  
BC010038 AAH10038 P18669
Q6FHU2
EC 5.4.2.4
EC 5.4.2.1
EC 3.1.3.13
BC011678 AAH11678 P18669
Q6FHU2
EC 5.4.2.4
EC 5.4.2.1
EC 3.1.3.13
BC053356 AAH53356 P18669
Q6FHU2
EC 5.4.2.4
EC 5.4.2.1
EC 3.1.3.13
BC062302 AAH62302 Q6P6D7  
BC066959 AAH66959 P18669
Q6FHU2
EC 5.4.2.4
EC 5.4.2.1
EC 3.1.3.13
BC073742 AAH73742 P18669
Q6FHU2
EC 5.4.2.4
EC 5.4.2.1
EC 3.1.3.13
BC157873 AAI57874 Q6FHU2  
DQ893065 ABM83991    
DQ896318 ABM87317    
AK223096 BAD96816 Q53G35  
AK292216 BAF84905 Q6FHU2  
AK293023 BAF85712 Q6FHU2  
AK312351 BAG35272 Q6FHU2  
AK295991 BAG58766 B4DJA4  
AK296619 BAG59227 B4DKL5  
AK297491 BAG59909 B4DMJ7  
AK315910 BAH14281 B7Z9E5  
CR541659 CAG46460 P18669
Q6FHU2
EC 5.4.2.4
EC 5.4.2.1
EC 3.1.3.13
CR541744 CAG46544 Q6FHK8  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens PGAM1 NP_002620 M.musculus Pgam1 18648 Gene Info NP_075907 100
D.melanogaster Pglym78 43447   NP_001034075 69
A.gambiae AgaP_AGAP001420 1281756   XP_321710 64

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)